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Widespread genetic alterations are a common feature of most colorectal cancers. While specific recurrent alterations may reveal the involvement of a gene or set of genes in the biology of the disease, the cumulated genomic damage is likely to reflect the biological history of the neoplastic cells. Furthermore, the functional implications behind many of these genetic changes may show the evolutionary potential of the neoplastic cells. High levels of genomic damage usually appear associated with increased aggressiveness in colorectal cancer, and the use of different assessments of genomic damage as independent prognostic factors has been proposed. Therefore, appropriate definition of the extent of cumulated alterations and their functional consequences may be of interest in the understanding and management of cancer. Investigations in our laboratory are addressed to the molecular characterization of human colorectal cancer progression. Main areas of work include (1) Development of methodologies for genetic and epigenetic profiling of human tumors, (2) Identification of the mechanisms underlying tumor progression, and (3) Genetic analysis of tumors to discover new markers with diagnostic, prognostic and therapeutic applications.